Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12160 and 12161 are separated by 343 nucleotides
12161 and 12162 are separated by 178 nucleotides
12162 and 12163 are separated by 229 nucleotides
12163 and 12164 are separated by 124 nucleotides
mRNA_3792: 12160 - K12811 DDX46, PRP5 ATP-dependent RNA helicase DDX46/PRP5, at 590,008 to 594,469
12160
mRNA_3793: 12161 - K15528 FAAH fatty acid amide hydrolase, at 594,813 to 596,952
12161
mRNA_3794: 12162 - KOG4618 Uncharacterized conserved protein, at 597,131 to 597,697
12162
mRNA_3795: 12163 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 597,927 to 600,358
12163
mRNA_3796: 12164 - Hypothetical Protein, at 600,483 to 601,004
12164
Group
Condition
mRNA
_3792
mRNA
_3793
mRNA
_3794
mRNA
_3795
mRNA
_3796
12160
12161
12162
12163
12164
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.1
-0.4
+0.3
+0.0
-0.8
growth on oleic acid
YNB Oleic Acid
+0.2
-0.2
+0.1
-0.8
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
+0.2
+0.1
-0.1
-0.9
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.3
-0.5
+0.1
-0.3
auxotrophy
YNB Glucose
+0.1
-0.3
+0.1
+0.1
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
+0.7
-0.6
+0.5
-0.1
-0.8
auxotrophy
Dropout Complete
+0.1
+0.0
+0.3
+0.1
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-0.1
-0.3
-1.1
+0.7
growth on ricinoleic acid
YNB Glucose
+0.6
-0.4
+0.2
+0.2
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.2
-0.1
-0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.5
-0.1
-0.3
+0.3
-0.2
growth on oleic acid
YNB Glucose
+0.6
-0.0
+0.2
-0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.6
-0.5
+0.9
-0.0
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.1
-0.3
+0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-0.1
+0.2
-0.5
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.2
+0.1
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
+0.1
+0.0
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
-0.2
+0.0
+0.5
growth on ypd
YPD
+0.6
+0.3
-0.2
-0.1
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.0
+0.3
+0.4
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.5
-0.0
+0.6
+0.3
+1.0
remove
mRNA_3792
plot
remove
mRNA_3793
plot
remove
mRNA_3794
remove
mRNA_3795
plot
remove
mRNA_3796
plot