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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12161 and 12162 are separated by 178 nucleotides
12162 and 12163 are separated by 229 nucleotides
12163 and 12164 are separated by 124 nucleotides
12164 and 12165 are separated by 180 nucleotides
mRNA_3793: 12161 - K15528 FAAH fatty acid amide hydrolase, at 594,813 to 596,952
12161
mRNA_3794: 12162 - KOG4618 Uncharacterized conserved protein, at 597,131 to 597,697
12162
mRNA_3795: 12163 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 597,927 to 600,358
12163
mRNA_3796: 12164 - Hypothetical Protein, at 600,483 to 601,004
12164
mRNA_3797: 12165 - Hypothetical Protein, at 601,185 to 602,135
12165
Group
Condition
mRNA
_3793
mRNA
_3794
mRNA
_3795
mRNA
_3796
mRNA
_3797
12161
12162
12163
12164
12165
growth on oleic acid
YNB Oleic Acid
-0.2
+0.1
-0.8
-0.8
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.5
+0.1
-0.3
-0.2
auxotrophy
YNB Glucose
-0.3
+0.1
+0.1
-0.5
-0.5
growth on ricinoleic acid
YNB Glucose
-0.4
+0.2
+0.2
-0.7
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
+0.5
-0.1
-0.8
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.3
+0.0
-0.8
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.3
-1.1
+0.7
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
+0.3
-0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.1
-0.1
-0.9
+0.1
growth on oleic acid
YNB Glucose
-0.0
+0.2
-0.3
-0.1
-0.2
auxotrophy
Dropout Complete
+0.0
+0.3
+0.1
-0.6
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.0
-0.3
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.1
-0.3
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
+0.3
-0.0
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.2
-0.5
+0.4
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
+0.9
-0.0
-0.6
+0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
+0.3
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.2
+0.0
+0.5
+0.2
growth on ypd
YPD
+0.3
-0.2
-0.1
+0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.3
+0.4
+0.5
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.6
+0.3
+1.0
+0.0
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