Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12162 and 12163 are separated by 229 nucleotides
12163 and 12164 are separated by 124 nucleotides
12164 and 12165 are separated by 180 nucleotides
12165 and 12166 are separated by 163 nucleotides
mRNA_3794: 12162 - KOG4618 Uncharacterized conserved protein, at 597,131 to 597,697
12162
mRNA_3795: 12163 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 597,927 to 600,358
12163
mRNA_3796: 12164 - Hypothetical Protein, at 600,483 to 601,004
12164
mRNA_3797: 12165 - Hypothetical Protein, at 601,185 to 602,135
12165
mRNA_3798: 12166 - K14771 NOC4, UTP19 U3 small nucleolar RNA-associated protein 19, at 602,299 to 604,532
12166
Group
Condition
mRNA
_3794
mRNA
_3795
mRNA
_3796
mRNA
_3797
mRNA
_3798
12162
12163
12164
12165
12166
growth on oleic acid
YNB Oleic Acid
+0.1
-0.8
-0.8
-0.4
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.1
-0.3
-0.2
N.D.
auxotrophy
YNB Glucose
+0.1
+0.1
-0.5
-0.5
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.1
-0.9
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-1.1
+0.7
-0.0
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
+0.2
-0.7
-0.4
N.D.
auxotrophy
Dropout Complete
+0.3
+0.1
-0.6
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.3
-0.2
-0.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.0
-0.8
-0.0
N.D.
growth on oleic acid
YNB Glucose
+0.2
-0.3
-0.1
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.3
-0.0
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.3
+0.2
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.3
-0.0
-0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
-0.1
-0.8
+0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.5
+0.4
-0.0
N.D.
growth on ypd
YPD
-0.2
-0.1
+0.4
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.0
+0.5
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.3
+0.2
+0.0
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.9
-0.0
-0.6
+0.7
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.4
+0.5
-0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.6
+0.3
+1.0
+0.0
N.D.
remove
mRNA_3794
plot
remove
mRNA_3795
plot
remove
mRNA_3796
remove
mRNA_3797
plot
remove
mRNA_3798
plot