Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12165 and 12166 are separated by 163 nucleotides12166 and 12167 are separated by 644 nucleotides12167 and 12168 are separated by 203 nucleotides12168 and 12169 are separated by 132 nucleotides mRNA_3797: 12165 - Hypothetical Protein, at 601,185 to 602,135 12165 mRNA_3798: 12166 - K14771 NOC4, UTP19 U3 small nucleolar RNA-associated protein 19, at 602,299 to 604,532 12166 mRNA_3799: 12167 - KOG1611 Predicted short chain-type dehydrogenase, at 605,177 to 606,005 12167 mRNA_3800: 12168 - K14715 SLC39A9, ZIP9 solute carrier family 39 (zinc transporter), member 9, at 606,209 to 607,581 12168 mRNA_3801: 12169 - K12591 RRP6, EXOSC10 exosome complex exonuclease RRP6, at 607,714 to 610,860 12169
Group Condition mRNA_3797 mRNA_3798 mRNA_3799 mRNA_3800 mRNA_3801
12165 12166 12167 12168 12169
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. -1.8 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. +0.3 -0.5 -0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. +0.4 -0.7 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.1 -0.4 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. -0.5 +0.0 +0.2
auxotrophy YNB Glucose -0.5 N.D. -0.5 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. +0.1 +0.4 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.0 -0.4 +0.2
growth on ricinoleic acid YNB Glucose -0.4 N.D. +0.5 -0.2 -0.0
auxotrophy Dropout Complete -0.2 N.D. -0.3 +0.3 +0.2
growth on oleic acid YNB Oleic Acid -0.4 N.D. +0.1 +0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. -0.2 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.2 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.1 +0.2 -0.2
growth on ypd YPD +0.3 N.D. +0.2 +0.3 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. -0.0 +0.2 +0.3
growth on oleic acid YNB Glucose -0.2 N.D. +0.3 +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. -0.2 -0.1 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.7 N.D. +0.5 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. +0.1 +0.5 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.0 +0.7 +0.5
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