Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12167 and 12168 are separated by 203 nucleotides12168 and 12169 are separated by 132 nucleotides12169 and 12170 are separated by 186 nucleotides12170 and 12171 are separated by 965 nucleotides mRNA_3799: 12167 - KOG1611 Predicted short chain-type dehydrogenase, at 605,177 to 606,005 12167 mRNA_3800: 12168 - K14715 SLC39A9, ZIP9 solute carrier family 39 (zinc transporter), member 9, at 606,209 to 607,581 12168 mRNA_3801: 12169 - K12591 RRP6, EXOSC10 exosome complex exonuclease RRP6, at 607,714 to 610,860 12169 mRNA_3802: 12170 - K01939 purA, ADSS adenylosuccinate synthase, at 611,047 to 612,951 12170 mRNA_3803: 12171 - Hypothetical Protein, at 613,917 to 616,021 12171
Group Condition mRNA_3799 mRNA_3800 mRNA_3801 mRNA_3802 mRNA_3803
12167 12168 12169 12170 12171
ypd buoyancy 40 hrs No Buoyancy Separation -1.8 +0.3 +0.2 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.7 -0.9 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.5 -0.6 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 -0.6 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.1 +0.3 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.4 -0.6 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.3 -0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.0 +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 -0.2 N.D. -0.2
auxotrophy Dropout Complete -0.3 +0.3 +0.2 N.D. -0.1
auxotrophy YNB Glucose -0.5 +0.3 +0.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.3 +0.0 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.4 +0.2 N.D. +0.6
growth on oleic acid YNB Oleic Acid +0.1 +0.4 -0.1 N.D. +0.2
growth on oleic acid YNB Glucose +0.3 +0.2 +0.1 N.D. -0.0
growth on ricinoleic acid YNB Glucose +0.5 -0.2 -0.0 N.D. +0.4
growth on ypd YPD +0.2 +0.3 -0.4 N.D. +0.7
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.2 +0.3 N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.5 +0.3 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.7 +0.5 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 +0.6 N.D. +0.8
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