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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12168 and 12169 are separated by 132 nucleotides
12169 and 12170 are separated by 186 nucleotides
12170 and 12171 are separated by 965 nucleotides
12171 and 12172 are separated by 320 nucleotides
mRNA_3800: 12168 - K14715 SLC39A9, ZIP9 solute carrier family 39 (zinc transporter), member 9, at 606,209 to 607,581
12168
mRNA_3801: 12169 - K12591 RRP6, EXOSC10 exosome complex exonuclease RRP6, at 607,714 to 610,860
12169
mRNA_3802: 12170 - K01939 purA, ADSS adenylosuccinate synthase, at 611,047 to 612,951
12170
mRNA_3803: 12171 - Hypothetical Protein, at 613,917 to 616,021
12171
mRNA_3804: 12172 - Hypothetical Protein, at 616,342 to 617,222
12172
Group
Condition
mRNA
_3800
mRNA
_3801
mRNA
_3802
mRNA
_3803
mRNA
_3804
12168
12169
12170
12171
12172
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.9
N.D.
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.6
N.D.
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.6
N.D.
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.3
N.D.
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.6
N.D.
-0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.2
N.D.
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.2
N.D.
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
N.D.
+0.4
-0.3
growth on oleic acid
YNB Glucose
+0.2
+0.1
N.D.
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
+0.4
-0.1
N.D.
+0.2
-0.2
auxotrophy
YNB Glucose
+0.3
+0.1
N.D.
+0.1
-0.3
auxotrophy
Dropout Complete
+0.3
+0.2
N.D.
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.2
N.D.
+0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.2
N.D.
+0.6
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.2
N.D.
-0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.0
N.D.
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.5
+0.3
N.D.
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.3
N.D.
+0.3
+0.0
growth on ypd
YPD
+0.3
-0.4
N.D.
+0.7
+0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.7
+0.5
N.D.
-0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.6
N.D.
+0.8
-0.2
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