Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12168 and 12169 are separated by 132 nucleotides12169 and 12170 are separated by 186 nucleotides12170 and 12171 are separated by 965 nucleotides12171 and 12172 are separated by 320 nucleotides mRNA_3800: 12168 - K14715 SLC39A9, ZIP9 solute carrier family 39 (zinc transporter), member 9, at 606,209 to 607,581 12168 mRNA_3801: 12169 - K12591 RRP6, EXOSC10 exosome complex exonuclease RRP6, at 607,714 to 610,860 12169 mRNA_3802: 12170 - K01939 purA, ADSS adenylosuccinate synthase, at 611,047 to 612,951 12170 mRNA_3803: 12171 - Hypothetical Protein, at 613,917 to 616,021 12171 mRNA_3804: 12172 - Hypothetical Protein, at 616,342 to 617,222 12172
Group Condition mRNA_3800 mRNA_3801 mRNA_3802 mRNA_3803 mRNA_3804
12168 12169 12170 12171 12172
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.9 N.D. -0.0 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.6 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.6 N.D. -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.3 N.D. -0.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.6 N.D. -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.2 N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.2 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.0 N.D. +0.4 -0.3
growth on oleic acid YNB Glucose +0.2 +0.1 N.D. -0.0 -0.2
growth on oleic acid YNB Oleic Acid +0.4 -0.1 N.D. +0.2 -0.2
auxotrophy YNB Glucose +0.3 +0.1 N.D. +0.1 -0.3
auxotrophy Dropout Complete +0.3 +0.2 N.D. -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.2 N.D. +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.2 N.D. +0.6 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.2 N.D. -0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.0 N.D. +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.3 N.D. +0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.3 N.D. +0.3 +0.0
growth on ypd YPD +0.3 -0.4 N.D. +0.7 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.7 +0.5 N.D. -0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.6 N.D. +0.8 -0.2
remove
mRNA_3800
plot
remove
mRNA_3801
plot
remove
mRNA_3802
remove
mRNA_3803
plot
remove
mRNA_3804
plot