Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12169 and 12170 are separated by 186 nucleotides12170 and 12171 are separated by 965 nucleotides12171 and 12172 are separated by 320 nucleotides12172 and 12173 are separated by 113 nucleotides mRNA_3801: 12169 - K12591 RRP6, EXOSC10 exosome complex exonuclease RRP6, at 607,714 to 610,860 12169 mRNA_3802: 12170 - K01939 purA, ADSS adenylosuccinate synthase, at 611,047 to 612,951 12170 mRNA_3803: 12171 - Hypothetical Protein, at 613,917 to 616,021 12171 mRNA_3804: 12172 - Hypothetical Protein, at 616,342 to 617,222 12172 mRNA_3805: 12173 - Hypothetical Protein, at 617,336 to 618,142 12173
Group Condition mRNA_3801 mRNA_3802 mRNA_3803 mRNA_3804 mRNA_3805
12169 12170 12171 12172 12173
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 N.D. -0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 N.D. -0.1 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.9 N.D. -0.0 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 N.D. -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.2 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. -0.5 -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.2 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. -0.1 +0.2 N.D.
growth on oleic acid YNB Glucose +0.1 N.D. -0.0 -0.2 N.D.
auxotrophy YNB Glucose +0.1 N.D. +0.1 -0.3 N.D.
auxotrophy Dropout Complete +0.2 N.D. -0.1 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. +0.1 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.3 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.1 -0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.0 N.D. +0.4 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. +0.1 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.5 N.D. -0.2 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. +0.3 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +0.6 -0.1 N.D.
growth on ypd YPD -0.4 N.D. +0.7 +0.5 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. +0.8 -0.2 N.D.
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