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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12171 and 12172 are separated by 320 nucleotides
12172 and 12173 are separated by 113 nucleotides
12173 and 12174 are separated by 140 nucleotides
12174 and 12175 are separated by 394 nucleotides
mRNA_3803: 12171 - Hypothetical Protein, at 613,917 to 616,021
12171
mRNA_3804: 12172 - Hypothetical Protein, at 616,342 to 617,222
12172
mRNA_3805: 12173 - Hypothetical Protein, at 617,336 to 618,142
12173
mRNA_3806: 12174 - K02365 ESP1 separase, at 618,283 to 626,082
12174
mRNA_3807: 12175 - HMMPfam-Docking domain of Afi1 for Arf3 in vesicle trafficking-PF07792,HMMPfam-Stabilization of polarity axis-PF08616, at 626,477 to 629,699
12175
Group
Condition
mRNA
_3803
mRNA
_3804
mRNA
_3805
mRNA
_3806
mRNA
_3807
12171
12172
12173
12174
12175
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.2
N.D.
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
N.D.
N.D.
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.2
N.D.
N.D.
-0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.3
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
N.D.
N.D.
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.1
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
N.D.
N.D.
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.2
N.D.
N.D.
+0.3
growth on oleic acid
YNB Glucose
-0.0
-0.2
N.D.
N.D.
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
N.D.
N.D.
+0.6
auxotrophy
YNB Glucose
+0.1
-0.3
N.D.
N.D.
+0.6
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
N.D.
N.D.
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
N.D.
N.D.
+0.6
auxotrophy
Dropout Complete
-0.1
-0.1
N.D.
N.D.
+0.8
growth on ricinoleic acid
YNB Glucose
+0.4
-0.3
N.D.
N.D.
+0.7
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.0
N.D.
N.D.
+0.6
growth on oleic acid
YNB Oleic Acid
+0.2
-0.2
N.D.
N.D.
+1.3
growth on ypd
YPD
+0.7
+0.5
N.D.
N.D.
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.3
N.D.
N.D.
+1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
-0.1
N.D.
N.D.
+1.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
-0.2
N.D.
N.D.
+2.0
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