Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12172 and 12173 are separated by 113 nucleotides12173 and 12174 are separated by 140 nucleotides12174 and 12175 are separated by 394 nucleotides12175 and 12176 are separated by 84 nucleotides mRNA_3804: 12172 - Hypothetical Protein, at 616,342 to 617,222 12172 mRNA_3805: 12173 - Hypothetical Protein, at 617,336 to 618,142 12173 mRNA_3806: 12174 - K02365 ESP1 separase, at 618,283 to 626,082 12174 mRNA_3807: 12175 - HMMPfam-Docking domain of Afi1 for Arf3 in vesicle trafficking-PF07792,HMMPfam-Stabilization of polarity axis-PF08616, at 626,477 to 629,699 12175 mRNA_3808: 12176 - Hypothetical Protein, at 629,784 to 630,446 12176
Group Condition mRNA_3804 mRNA_3805 mRNA_3806 mRNA_3807 mRNA_3808
12172 12173 12174 12175 12176
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. N.D. -0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. N.D. -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. N.D. -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. N.D. -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.0 N.D.
auxotrophy YNB Glucose -0.3 N.D. N.D. +0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. N.D. +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. +0.6 N.D.
growth on ricinoleic acid YNB Glucose -0.3 N.D. N.D. +0.7 N.D.
growth on oleic acid YNB Glucose -0.2 N.D. N.D. +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. N.D. +0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. N.D. +0.6 N.D.
auxotrophy Dropout Complete -0.1 N.D. N.D. +0.8 N.D.
growth on ypd YPD +0.5 N.D. N.D. +0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.2 N.D. N.D. +1.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. N.D. +1.7 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. +1.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. N.D. +2.0 N.D.
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