Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12175 and 12176 are separated by 84 nucleotides12176 and 12177 are separated by 717 nucleotides12177 and 12178 are separated by 403 nucleotides12178 and 12179 are separated by 359 nucleotides mRNA_3807: 12175 - HMMPfam-Docking domain of Afi1 for Arf3 in vesicle trafficking-PF07792,HMMPfam-Stabilization of polarity axis-PF08616, at 626,477 to 629,699 12175 mRNA_3808: 12176 - Hypothetical Protein, at 629,784 to 630,446 12176 mRNA_3809: 12177 - Hypothetical Protein, at 631,164 to 632,051 12177 mRNA_3810: 12178 - K12869 CRN, CRNKL1, CLF1, SYF3 crooked neck, at 632,455 to 635,215 12178 mRNA_3811: 12179 - Hypothetical Protein, at 635,575 to 638,591 12179
Group Condition mRNA_3807 mRNA_3808 mRNA_3809 mRNA_3810 mRNA_3811
12175 12176 12177 12178 12179
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. N.D. N.D. -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. N.D. N.D. -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 N.D. N.D. N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. N.D. N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 N.D. N.D. N.D. -0.7
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. N.D. N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.6 N.D. N.D. N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. N.D. N.D. +0.1
growth on ypd YPD +0.3 N.D. N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. N.D. N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine +0.6 N.D. N.D. N.D. +0.3
auxotrophy YNB Glucose +0.6 N.D. N.D. N.D. +0.4
growth on oleic acid YNB Glucose +0.6 N.D. N.D. N.D. +0.4
auxotrophy Dropout Complete +0.8 N.D. N.D. N.D. +0.3
growth on ricinoleic acid YNB Glucose +0.7 N.D. N.D. N.D. +0.5
facs on lipid accumulation Sorted High BODIPY Gate +1.4 N.D. N.D. N.D. -0.1
growth on oleic acid YNB Oleic Acid +1.3 N.D. N.D. N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +2.0 N.D. N.D. N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +1.7 N.D. N.D. N.D. +0.2
remove
mRNA_3807
plot		 remove
mRNA_3808
plot		 remove
mRNA_3809		 remove
mRNA_3810
plot		 remove
mRNA_3811
plot