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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12176 and 12177 are separated by 717 nucleotides
12177 and 12178 are separated by 403 nucleotides
12178 and 12179 are separated by 359 nucleotides
12179 and 12180 are separated by 249 nucleotides
mRNA_3808: 12176 - Hypothetical Protein, at 629,784 to 630,446
12176
mRNA_3809: 12177 - Hypothetical Protein, at 631,164 to 632,051
12177
mRNA_3810: 12178 - K12869 CRN, CRNKL1, CLF1, SYF3 crooked neck, at 632,455 to 635,215
12178
mRNA_3811: 12179 - Hypothetical Protein, at 635,575 to 638,591
12179
mRNA_3812: 12180 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 638,841 to 639,831
12180
Group
Condition
mRNA
_3808
mRNA
_3809
mRNA
_3810
mRNA
_3811
mRNA
_3812
12176
12177
12178
12179
12180
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.8
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
-0.9
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.7
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
-0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
+0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
+0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
-0.3
-0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
-0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
+0.2
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
+0.5
-0.6
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
+0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.1
+0.2
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
+0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
+0.4
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.2
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
+0.4
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
+0.3
+0.2
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
+0.4
+0.3
growth on ypd
YPD
N.D.
N.D.
N.D.
+0.2
+1.2
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