Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12178 and 12179 are separated by 359 nucleotides12179 and 12180 are separated by 249 nucleotides12180 and 12181 are separated by 290 nucleotides12181 and 12182 are separated by 20 nucleotides mRNA_3810: 12178 - K12869 CRN, CRNKL1, CLF1, SYF3 crooked neck, at 632,455 to 635,215 12178 mRNA_3811: 12179 - Hypothetical Protein, at 635,575 to 638,591 12179 mRNA_3812: 12180 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 638,841 to 639,831 12180 mRNA_3813: 12181 - BLAST zinc finger, C3HC4 type (RING finger) protein [Rhizoc..., at 640,122 to 642,119 12181 mRNA_3814: 12182 - PRINTS-Proline rich extensin signature-PR01217, at 642,140 to 643,933 12182
Group Condition mRNA_3810 mRNA_3811 mRNA_3812 mRNA_3813 mRNA_3814
12178 12179 12180 12181 12182
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 -0.0 -0.6 -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.0 -0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.3 -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 -0.3 -0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 -0.4 +0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.5 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.8 -0.2 +0.8 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.9 -0.0 +0.5 +0.2
growth on oleic acid YNB Glucose N.D. +0.4 +0.3 -0.7 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.2 +0.0 -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.4 +0.2 -0.2 -0.2
auxotrophy Dropout Complete N.D. +0.3 -0.3 +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.1 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.7 -0.1 +0.5 +0.4
growth on ricinoleic acid YNB Glucose N.D. +0.5 -0.6 +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 -0.1 +0.3 -0.2
auxotrophy YNB Glucose N.D. +0.4 -0.2 +0.4 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 -0.1 +0.2 +0.8
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.2 +0.5 -0.2
growth on ypd YPD N.D. +0.2 +1.2 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.2 +0.8 +0.3
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