Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12180 and 12181 are separated by 290 nucleotides12181 and 12182 are separated by 20 nucleotides12182 and 12183 are separated by 420 nucleotides12183 and 12184 are separated by 290 nucleotides mRNA_3812: 12180 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 638,841 to 639,831 12180 mRNA_3813: 12181 - BLAST zinc finger, C3HC4 type (RING finger) protein [Rhizoc..., at 640,122 to 642,119 12181 mRNA_3814: 12182 - PRINTS-Proline rich extensin signature-PR01217, at 642,140 to 643,933 12182 mRNA_3815: 12183 - K06631 PLK1 polo-like kinase 1, at 644,354 to 647,784 12183 mRNA_3816: 12184 - KOG3613 Dopey and related predicted leucine zipper transcription factors, at 648,075 to 655,221 12184
Group Condition mRNA_3812 mRNA_3813 mRNA_3814 mRNA_3815 mRNA_3816
12180 12181 12182 12183 12184
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.2 +0.8 -4.6 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.1 -0.2 -3.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.2 -0.3 -2.6 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.0 -0.5 -2.0 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.6 -0.5 -1.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.2 -0.2 -1.3 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.5 -0.1 -0.9 +0.6
growth on oleic acid YNB Glucose +0.3 -0.7 -0.2 -0.7 +0.5
growth on ricinoleic acid YNB Glucose -0.6 +0.2 +0.2 -0.9 +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 -0.0 -0.4 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.3 -0.2 -0.7 +0.6
auxotrophy Dropout Complete -0.3 +0.1 -0.0 -0.5 +0.8
growth on oleic acid YNB Oleic Acid +0.2 -0.2 -0.2 -0.5 +1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.8 -0.0 -0.4 +0.2
auxotrophy YNB Glucose -0.2 +0.4 -0.1 -0.3 +0.7
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 -0.1 +0.5 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.5 -0.2 -0.4 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.5 +0.2 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.8 +0.3 -0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.5 +0.4 +1.2 +0.3
growth on ypd YPD +1.2 +0.3 -0.3 +1.8 +0.1
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