Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12185 and 12186 are separated by 87 nucleotides12186 and 12187 are separated by 263 nucleotides12187 and 12188 are separated by 442 nucleotides12188 and 12189 are separated by 236 nucleotides mRNA_3817: 12185 - SUPERFAMILY--SSF52047, at 655,525 to 657,844 12185 mRNA_3818: 12186 - K09650 PARL, PSARL, PCP1 rhomboid-like protein, at 657,932 to 659,126 12186 mRNA_3819: 12187 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 659,390 to 660,393 12187 mRNA_3820: 12188 - K20046 SLA1 actin cytoskeleton-regulatory complex protein SLA1, at 660,836 to 665,185 12188 mRNA_3821: 12189 - K19001 HELLS, DDM1 ATP-dependent DNA helicase, at 665,422 to 669,105 12189
Group Condition mRNA_3817 mRNA_3818 mRNA_3819 mRNA_3820 mRNA_3821
12185 12186 12187 12188 12189
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.4 +0.1 N.D. -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.3 -0.3 N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.6 -2.0 N.D. +0.4
growth on ricinoleic acid YNB Glucose -0.3 -0.1 -0.2 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.5 +0.0 N.D. -0.2
growth on oleic acid YNB Glucose -0.2 -0.3 +0.2 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.0 +0.3 N.D. -0.3
growth on ypd YPD +0.1 -0.7 +0.4 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 +0.1 N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.0 -0.1 +0.6 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.4 +0.2 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.2 +0.2 N.D. -0.2
auxotrophy YNB Glucose -0.1 -0.1 +0.7 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 +0.5 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 +0.7 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 +0.5 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.6 +1.2 N.D. -0.2
auxotrophy Dropout Complete +0.3 -0.0 +1.5 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.5 +2.4 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +1.1 +1.8 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.4 +2.1 N.D. +0.1
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