Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12186 and 12187 are separated by 263 nucleotides12187 and 12188 are separated by 442 nucleotides12188 and 12189 are separated by 236 nucleotides12189 and 12190 are separated by 122 nucleotides mRNA_3818: 12186 - K09650 PARL, PSARL, PCP1 rhomboid-like protein, at 657,932 to 659,126 12186 mRNA_3819: 12187 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 659,390 to 660,393 12187 mRNA_3820: 12188 - K20046 SLA1 actin cytoskeleton-regulatory complex protein SLA1, at 660,836 to 665,185 12188 mRNA_3821: 12189 - K19001 HELLS, DDM1 ATP-dependent DNA helicase, at 665,422 to 669,105 12189 mRNA_3822: 12190 - HMMPfam-Protein of unknown function (DUF2781)-PF10914,PIRSF--PIRSF031032, at 669,228 to 670,038 12190
Group Condition mRNA_3818 mRNA_3819 mRNA_3820 mRNA_3821 mRNA_3822
12186 12187 12188 12189 12190
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.3 N.D. -0.3 -1.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -2.0 N.D. +0.4 -0.6
growth on oleic acid YNB Glucose -0.3 +0.2 N.D. -0.3 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.0 N.D. -0.2 -0.4
growth on ypd YPD -0.7 +0.4 N.D. +0.0 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 N.D. -0.4 +0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.2 N.D. -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.1 N.D. -0.5 +0.6
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.5 N.D. +0.1 -0.8
growth on oleic acid YNB Oleic Acid -0.1 +0.6 N.D. -0.3 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.7 N.D. +0.2 -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 N.D. -0.0 +0.4
auxotrophy YNB Glucose -0.1 +0.7 N.D. +0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 N.D. -0.2 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.2 N.D. -0.0 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.5 N.D. +0.2 +0.1
auxotrophy Dropout Complete -0.0 +1.5 N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +2.4 N.D. -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +1.2 N.D. -0.2 +1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.1 +1.8 N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +2.1 N.D. +0.1 +0.5
remove
mRNA_3818
plot
remove
mRNA_3819
plot
remove
mRNA_3820
remove
mRNA_3821
plot
remove
mRNA_3822
plot