Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12187 and 12188 are separated by 442 nucleotides12188 and 12189 are separated by 236 nucleotides12189 and 12190 are separated by 122 nucleotides12190 and 12191 are separated by 96 nucleotides mRNA_3819: 12187 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 659,390 to 660,393 12187 mRNA_3820: 12188 - K20046 SLA1 actin cytoskeleton-regulatory complex protein SLA1, at 660,836 to 665,185 12188 mRNA_3821: 12189 - K19001 HELLS, DDM1 ATP-dependent DNA helicase, at 665,422 to 669,105 12189 mRNA_3822: 12190 - HMMPfam-Protein of unknown function (DUF2781)-PF10914,PIRSF--PIRSF031032, at 669,228 to 670,038 12190 mRNA_3823: 12191 - Hypothetical Protein, at 670,135 to 670,720 12191
Group Condition mRNA_3819 mRNA_3820 mRNA_3821 mRNA_3822 mRNA_3823
12187 12188 12189 12190 12191
ypd buoyancy 40 hrs No Buoyancy Separation -2.0 N.D. +0.4 -0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.3 -1.7 N.D.
growth on oleic acid YNB Glucose +0.2 N.D. -0.3 -0.9 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. -0.2 -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.2 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.4 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.5 N.D. +0.1 -0.8 N.D.
growth on oleic acid YNB Oleic Acid +0.6 N.D. -0.3 -0.4 N.D.
growth on ypd YPD +0.4 N.D. +0.0 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.7 N.D. +0.2 -0.8 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. -0.5 +0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.0 +0.4 N.D.
auxotrophy YNB Glucose +0.7 N.D. +0.0 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.0 +0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. -0.2 +0.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.5 N.D. +0.2 +0.1 N.D.
auxotrophy Dropout Complete +1.5 N.D. -0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.8 N.D. -0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +2.4 N.D. -0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.2 N.D. -0.2 +1.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +2.1 N.D. +0.1 +0.5 N.D.
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