Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12188 and 12189 are separated by 236 nucleotides12189 and 12190 are separated by 122 nucleotides12190 and 12191 are separated by 96 nucleotides12191 and 12192 are separated by 45 nucleotides mRNA_3820: 12188 - K20046 SLA1 actin cytoskeleton-regulatory complex protein SLA1, at 660,836 to 665,185 12188 mRNA_3821: 12189 - K19001 HELLS, DDM1 ATP-dependent DNA helicase, at 665,422 to 669,105 12189 mRNA_3822: 12190 - HMMPfam-Protein of unknown function (DUF2781)-PF10914,PIRSF--PIRSF031032, at 669,228 to 670,038 12190 mRNA_3823: 12191 - Hypothetical Protein, at 670,135 to 670,720 12191 mRNA_3824: 12192 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 670,766 to 671,114 12192
Group Condition mRNA_3820 mRNA_3821 mRNA_3822 mRNA_3823 mRNA_3824
12188 12189 12190 12191 12192
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 -1.7 N.D. N.D.
growth on oleic acid YNB Glucose N.D. -0.3 -0.9 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.8 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.3 -0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.8 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 -0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 -0.1 N.D. N.D.
growth on ypd YPD N.D. +0.0 -0.4 N.D. N.D.
auxotrophy Dropout Complete N.D. -0.1 -0.3 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 -0.6 N.D. N.D.
auxotrophy YNB Glucose N.D. +0.0 -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 +0.6 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 +0.4 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.5 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 +0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 +0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 +1.2 N.D. N.D.
remove
mRNA_3820
plot		 remove
mRNA_3821
plot		 remove
mRNA_3822		 remove
mRNA_3823
plot		 remove
mRNA_3824
plot