Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12196 and 12197 are separated by 729 nucleotides12197 and 12198 are separated by 691 nucleotides12198 and 12199 are separated by 355 nucleotides12199 and 12200 are separated by 315 nucleotides mRNA_3828: 12196 - Hypothetical Protein, at 682,813 to 683,280 12196 mRNA_3829: 12197 - KOG0519 Sensory transduction histidine kinase, at 684,010 to 687,695 12197 mRNA_3830: 12198 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 688,387 to 689,344 12198 mRNA_3831: 12199 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 689,700 to 690,633 12199 mRNA_3832: 12200 - Hypothetical Protein, at 690,949 to 691,867 12200
Group Condition mRNA_3828 mRNA_3829 mRNA_3830 mRNA_3831 mRNA_3832
12196 12197 12198 12199 12200
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -1.1 N.D. -0.8 -0.9
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.3 N.D. -1.1 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 N.D. +0.2 -0.7
auxotrophy YNB Glucose +0.2 -0.5 N.D. -0.3 +0.1
growth on oleic acid YNB Glucose +0.1 -0.3 N.D. -0.0 -0.4
auxotrophy Dropout Complete +0.1 -0.4 N.D. -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.3 N.D. -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.5 N.D. -0.3 +0.4
growth on ricinoleic acid YNB Glucose +0.1 -0.3 N.D. -0.3 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 N.D. -0.6 +0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.3 N.D. -0.4 +0.8
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.4 N.D. -0.3 +0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.5 N.D. +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 N.D. -0.5 +0.8
growth on oleic acid YNB Oleic Acid +0.1 +0.0 N.D. +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 N.D. +0.1 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 N.D. -0.1 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 N.D. -0.1 +0.9
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 N.D. -0.3 +1.2
growth on ypd YPD -0.1 +0.3 N.D. +0.3 +3.3
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