Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12197 and 12198 are separated by 691 nucleotides12198 and 12199 are separated by 355 nucleotides12199 and 12200 are separated by 315 nucleotides12200 and 12201 are separated by 300 nucleotides mRNA_3829: 12197 - KOG0519 Sensory transduction histidine kinase, at 684,010 to 687,695 12197 mRNA_3830: 12198 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 688,387 to 689,344 12198 mRNA_3831: 12199 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 689,700 to 690,633 12199 mRNA_3832: 12200 - Hypothetical Protein, at 690,949 to 691,867 12200 mRNA_3833: 12201 - K15196 BRF1, GTF3B transcription factor IIIB 90 kDa subunit, at 692,168 to 694,484 12201
Group Condition mRNA_3829 mRNA_3830 mRNA_3831 mRNA_3832 mRNA_3833
12197 12198 12199 12200 12201
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 N.D. -0.8 -0.9 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -1.1 -0.9 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. +0.2 -0.7 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. -0.4 +0.8 -1.0
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.3 +0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. -0.3 +0.4 +0.1
auxotrophy YNB Glucose -0.5 N.D. -0.3 +0.1 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.6 +0.8 -0.2
auxotrophy Dropout Complete -0.4 N.D. -0.1 -0.1 +0.5
growth on oleic acid YNB Glucose -0.3 N.D. -0.0 -0.4 +0.5
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. -0.3 +0.6 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 N.D. +0.1 -0.3 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.4 +0.2 +1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.1 +0.5 +0.1
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.1 +0.3 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.1 +0.3 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. -0.1 +0.9 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. -0.5 +0.8 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.3 +1.2 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. +0.1 +0.5 +1.4
growth on ypd YPD +0.3 N.D. +0.3 +3.3 -0.5
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