Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12198 and 12199 are separated by 355 nucleotides
12199 and 12200 are separated by 315 nucleotides
12200 and 12201 are separated by 300 nucleotides
12201 and 12202 are separated by 922 nucleotides
mRNA_3830: 12198 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 688,387 to 689,344
12198
mRNA_3831: 12199 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 689,700 to 690,633
12199
mRNA_3832: 12200 - Hypothetical Protein, at 690,949 to 691,867
12200
mRNA_3833: 12201 - K15196 BRF1, GTF3B transcription factor IIIB 90 kDa subunit, at 692,168 to 694,484
12201
mRNA_3834: 12202 - Hypothetical Protein, at 695,407 to 697,402
12202
Group
Condition
mRNA
_3830
mRNA
_3831
mRNA
_3832
mRNA
_3833
mRNA
_3834
12198
12199
12200
12201
12202
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-1.1
-0.9
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
-0.7
-0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.8
-0.9
+0.3
+0.8
growth on ricinoleic acid
YNB Glucose
N.D.
-0.3
+0.4
-0.3
+0.2
growth on oleic acid
YNB Glucose
N.D.
-0.0
-0.4
+0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.5
+0.8
+0.6
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.6
+0.8
-0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.4
+0.8
-1.0
+0.8
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
+0.3
+0.5
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
+0.5
+0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.3
+0.0
+0.9
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
+0.9
+0.2
-0.3
auxotrophy
Dropout Complete
N.D.
-0.1
-0.1
+0.5
+0.9
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
+0.4
+0.1
+0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
+0.3
+0.4
+0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
+1.2
+0.6
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.4
+0.2
+1.0
+0.5
auxotrophy
YNB Glucose
N.D.
-0.3
+0.1
+0.5
+1.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.3
+0.6
+0.2
+1.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
+0.5
+1.4
+0.2
growth on ypd
YPD
N.D.
+0.3
+3.3
-0.5
+0.0
remove
mRNA_3830
plot
remove
mRNA_3831
plot
remove
mRNA_3832
remove
mRNA_3833
plot
remove
mRNA_3834
plot