Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12199 and 12200 are separated by 315 nucleotides12200 and 12201 are separated by 300 nucleotides12201 and 12202 are separated by 922 nucleotides12202 and 12203 are separated by 235 nucleotides mRNA_3831: 12199 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 689,700 to 690,633 12199 mRNA_3832: 12200 - Hypothetical Protein, at 690,949 to 691,867 12200 mRNA_3833: 12201 - K15196 BRF1, GTF3B transcription factor IIIB 90 kDa subunit, at 692,168 to 694,484 12201 mRNA_3834: 12202 - Hypothetical Protein, at 695,407 to 697,402 12202 mRNA_3835: 12203 - K09260 MEF2A MADS-box transcription enhancer factor 2A, at 697,638 to 699,790 12203
Group Condition mRNA_3831 mRNA_3832 mRNA_3833 mRNA_3834 mRNA_3835
12199 12200 12201 12202 12203
facs on lipid accumulation Sorted High BODIPY Gate -1.1 -0.9 +0.1 -0.3 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.7 -0.2 -0.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.9 +0.3 +0.8 -0.2
growth on ricinoleic acid YNB Glucose -0.3 +0.4 -0.3 +0.2 -0.4
growth on oleic acid YNB Glucose -0.0 -0.4 +0.5 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.8 +0.6 -0.8 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.8 -1.0 +0.8 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.8 -0.2 +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.3 +0.0 +0.9 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.3 +0.5 -0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.9 +0.2 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.5 +0.1 +0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.4 +0.1 +0.9 -0.3
auxotrophy YNB Glucose -0.3 +0.1 +0.5 +1.1 -0.4
auxotrophy Dropout Complete -0.1 -0.1 +0.5 +0.9 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 +1.2 +0.6 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.3 +0.4 +0.4 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.6 +0.2 +1.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.2 +1.0 +0.5 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.5 +1.4 +0.2 +0.4
growth on ypd YPD +0.3 +3.3 -0.5 +0.0 +0.4
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