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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12200 and 12201 are separated by 300 nucleotides
12201 and 12202 are separated by 922 nucleotides
12202 and 12203 are separated by 235 nucleotides
12203 and 12204 are separated by 1060 nucleotides
mRNA_3832: 12200 - Hypothetical Protein, at 690,949 to 691,867
12200
mRNA_3833: 12201 - K15196 BRF1, GTF3B transcription factor IIIB 90 kDa subunit, at 692,168 to 694,484
12201
mRNA_3834: 12202 - Hypothetical Protein, at 695,407 to 697,402
12202
mRNA_3835: 12203 - K09260 MEF2A MADS-box transcription enhancer factor 2A, at 697,638 to 699,790
12203
mRNA_3836: 12204 - Hypothetical Protein, at 700,851 to 701,786
12204
Group
Condition
mRNA
_3832
mRNA
_3833
mRNA
_3834
mRNA
_3835
mRNA
_3836
12200
12201
12202
12203
12204
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.2
-0.3
+0.1
-0.1
growth on oleic acid
YNB Glucose
-0.4
+0.5
-0.2
-0.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
+0.1
-0.3
+0.7
-0.1
growth on ricinoleic acid
YNB Glucose
+0.4
-0.3
+0.2
-0.4
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
+0.3
+0.8
-0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.8
-0.2
+0.2
-0.2
-0.2
growth on oleic acid
YNB Oleic Acid
+0.3
+0.5
-0.4
+0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.8
+0.6
-0.8
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
-1.0
+0.8
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.1
+0.9
-0.3
-0.5
auxotrophy
Dropout Complete
-0.1
+0.5
+0.9
+0.0
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+0.1
+0.1
+0.3
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.9
+0.2
-0.3
+0.1
+0.2
auxotrophy
YNB Glucose
+0.1
+0.5
+1.1
-0.4
-0.3
ypd buoyancy
40 hrs High Buoyancy
+1.2
+0.6
-0.3
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.4
+0.4
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.6
+0.2
+1.1
-0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.0
+0.9
-0.1
+1.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+1.0
+0.5
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+1.4
+0.2
+0.4
-0.1
growth on ypd
YPD
+3.3
-0.5
+0.0
+0.4
-0.8
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