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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12202 and 12203 are separated by 235 nucleotides
12203 and 12204 are separated by 1060 nucleotides
12204 and 12205 are separated by 2604 nucleotides
12205 and 12206 are separated by 345 nucleotides
mRNA_3834: 12202 - Hypothetical Protein, at 695,407 to 697,402
12202
mRNA_3835: 12203 - K09260 MEF2A MADS-box transcription enhancer factor 2A, at 697,638 to 699,790
12203
mRNA_3836: 12204 - Hypothetical Protein, at 700,851 to 701,786
12204
mRNA_3837: 12205 - K01044 CES1 carboxylesterase 1, at 704,391 to 706,480
12205
mRNA_3838: 12206 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 706,826 to 713,191
12206
Group
Condition
mRNA
_3834
mRNA
_3835
mRNA
_3836
mRNA
_3837
mRNA
_3838
12202
12203
12204
12205
12206
growth on ricinoleic acid
YNB Glucose
+0.2
-0.4
-0.2
-0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.8
-0.2
-0.3
+0.1
-1.3
growth on oleic acid
YNB Glucose
-0.2
-0.3
-0.2
+0.4
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.2
-0.2
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.3
+0.0
-0.3
-0.6
growth on oleic acid
YNB Oleic Acid
-0.4
+0.2
-0.2
+0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.8
-0.1
+0.1
-0.0
+0.5
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
-0.2
+0.0
+0.2
growth on ypd
YPD
+0.0
+0.4
-0.8
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.1
-0.1
+0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.7
-0.1
+0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.1
+0.2
-0.1
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
-0.3
+0.2
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
+0.5
-0.2
+0.3
-0.7
auxotrophy
YNB Glucose 75mM Arginine
+1.1
-0.1
-0.3
+0.3
-0.6
auxotrophy
YNB Glucose
+1.1
-0.4
-0.3
+0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.9
-0.3
-0.5
+0.3
+0.0
auxotrophy
Dropout Complete
+0.9
+0.0
-0.4
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.2
+0.1
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.4
-0.1
+0.3
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.9
-0.1
+1.0
-0.4
+0.6
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