Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12205 and 12206 are separated by 345 nucleotides12206 and 12207 are separated by 164 nucleotides12207 and 12208 are separated by 295 nucleotides12208 and 12209 are separated by 262 nucleotides mRNA_3837: 12205 - K01044 CES1 carboxylesterase 1, at 704,391 to 706,480 12205 mRNA_3838: 12206 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 706,826 to 713,191 12206 mRNA_3839: 12207 - BLAST E3 ubiquitin-protein ligase RNF213 [Mus musculus] [Rh..., at 713,356 to 714,077 12207 mRNA_3840: 12208 - K18849 BMT2 25S rRNA (adenine2142-N1)-methyltransferase, at 714,373 to 715,825 12208 mRNA_3841: 12209 - K13431 SRPR signal recognition particle receptor subunit alpha, at 716,088 to 718,591 12209
Group Condition mRNA_3837 mRNA_3838 mRNA_3839 mRNA_3840 mRNA_3841
12205 12206 12207 12208 12209
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -1.3 -1.5 +0.2 -1.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.6 -1.3 -0.0 -0.8
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.7 -0.6 -0.1 -1.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.6 -2.0 -0.6 +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.3 -0.1 -0.0 -1.4
growth on ricinoleic acid YNB Glucose -0.1 -0.4 -0.4 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.1 -0.3 -0.3 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.3 -0.5 -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.0 -0.8 -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.6 -0.5 +0.5 -0.8
growth on oleic acid YNB Glucose +0.4 -0.4 +0.1 -0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 -0.4 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 +0.1 -0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.3 -0.3 +0.4 -0.3 -0.5
auxotrophy YNB Glucose +0.3 -0.3 -0.1 +0.4 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.5 -0.5 -0.3 -0.3
auxotrophy Dropout Complete +0.3 -0.2 +0.2 +0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.3 -0.7 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.3 +0.5 -0.2 -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.5 -0.1 +0.5 -0.2
growth on ypd YPD +0.2 -0.2 +0.3 +0.5 -0.0
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