Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12206 and 12207 are separated by 164 nucleotides12207 and 12208 are separated by 295 nucleotides12208 and 12209 are separated by 262 nucleotides12209 and 12210 are separated by 260 nucleotides mRNA_3838: 12206 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 706,826 to 713,191 12206 mRNA_3839: 12207 - BLAST E3 ubiquitin-protein ligase RNF213 [Mus musculus] [Rh..., at 713,356 to 714,077 12207 mRNA_3840: 12208 - K18849 BMT2 25S rRNA (adenine2142-N1)-methyltransferase, at 714,373 to 715,825 12208 mRNA_3841: 12209 - K13431 SRPR signal recognition particle receptor subunit alpha, at 716,088 to 718,591 12209 mRNA_3842: 12210 - K18179 COA6 cytochrome c oxidase assembly factor 6, at 718,852 to 719,357 12210
Group Condition mRNA_3838 mRNA_3839 mRNA_3840 mRNA_3841 mRNA_3842
12206 12207 12208 12209 12210
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 -1.5 +0.2 -1.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.6 -0.1 -1.5 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -1.3 -0.0 -0.8 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.5 -0.4 +0.2 -0.9
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1 -0.0 -1.4 +0.0
growth on ricinoleic acid YNB Glucose -0.4 -0.4 +0.1 -0.5 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 -0.3 -1.0 -0.1
growth on oleic acid YNB Oleic Acid -0.3 +0.4 -0.3 -0.5 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -2.0 -0.6 +0.6 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.8 -0.4 -0.2 +0.3
growth on oleic acid YNB Glucose -0.4 +0.1 -0.2 -0.6 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.5 +0.5 -0.8 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.1 -0.2 +0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.4 -0.1 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.5 -0.3 -0.3 +0.0
auxotrophy Dropout Complete -0.2 +0.2 +0.0 -0.5 -0.1
auxotrophy YNB Glucose -0.3 -0.1 +0.4 -0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.7 +0.3 -0.0 +0.1
growth on ypd YPD -0.2 +0.3 +0.5 -0.0 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.5 -0.2 -0.9 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.5 -0.1 +0.5 -0.2 -0.2
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