Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12207 and 12208 are separated by 295 nucleotides12208 and 12209 are separated by 262 nucleotides12209 and 12210 are separated by 260 nucleotides12210 and 12211 are separated by 156 nucleotides mRNA_3839: 12207 - BLAST E3 ubiquitin-protein ligase RNF213 [Mus musculus] [Rh..., at 713,356 to 714,077 12207 mRNA_3840: 12208 - K18849 BMT2 25S rRNA (adenine2142-N1)-methyltransferase, at 714,373 to 715,825 12208 mRNA_3841: 12209 - K13431 SRPR signal recognition particle receptor subunit alpha, at 716,088 to 718,591 12209 mRNA_3842: 12210 - K18179 COA6 cytochrome c oxidase assembly factor 6, at 718,852 to 719,357 12210 mRNA_3843: 12211 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 719,514 to 723,213 12211
Group Condition mRNA_3839 mRNA_3840 mRNA_3841 mRNA_3842 mRNA_3843
12207 12208 12209 12210 12211
facs on lipid accumulation Sorted Low BODIPY Gate -1.5 +0.2 -1.4 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.1 -1.5 -0.4 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -2.0 -0.6 +0.6 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.3 -1.0 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.3 -0.0 -0.8 +0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.4 +0.2 -0.9 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.8 -0.4 -0.2 +0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 -1.4 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.3 -0.3 +0.0 -0.2
growth on ricinoleic acid YNB Glucose -0.4 +0.1 -0.5 -0.4 +0.0
growth on oleic acid YNB Oleic Acid +0.4 -0.3 -0.5 -0.5 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 -0.1 -0.2 +0.0
growth on oleic acid YNB Glucose +0.1 -0.2 -0.6 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.5 -0.8 +0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 +0.1 -0.5 +0.1
auxotrophy Dropout Complete +0.2 +0.0 -0.5 -0.1 -0.1
auxotrophy YNB Glucose -0.1 +0.4 -0.6 +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.7 +0.3 -0.0 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.2 -0.9 +0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.5 -0.2 -0.2 -0.0
growth on ypd YPD +0.3 +0.5 -0.0 -0.5 +0.3
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