Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12208 and 12209 are separated by 262 nucleotides12209 and 12210 are separated by 260 nucleotides12210 and 12211 are separated by 156 nucleotides12211 and 12212 are separated by 115 nucleotides mRNA_3840: 12208 - K18849 BMT2 25S rRNA (adenine2142-N1)-methyltransferase, at 714,373 to 715,825 12208 mRNA_3841: 12209 - K13431 SRPR signal recognition particle receptor subunit alpha, at 716,088 to 718,591 12209 mRNA_3842: 12210 - K18179 COA6 cytochrome c oxidase assembly factor 6, at 718,852 to 719,357 12210 mRNA_3843: 12211 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 719,514 to 723,213 12211 mRNA_3844: 12212 - HMMPfam-Afadin- and alpha -actinin-Binding-PF11559, at 723,329 to 725,612 12212
Group Condition mRNA_3840 mRNA_3841 mRNA_3842 mRNA_3843 mRNA_3844
12208 12209 12210 12211 12212
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -1.0 -0.1 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.5 -0.4 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.3 +0.0 -0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.3 -0.5 -0.5 -0.0 +0.4
growth on oleic acid YNB Glucose -0.2 -0.6 +0.1 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -1.4 +0.0 +0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.2 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.9 +0.4 -0.0 -0.0
growth on ricinoleic acid YNB Glucose +0.1 -0.5 -0.4 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.8 +0.3 -0.0 -0.1
auxotrophy Dropout Complete +0.0 -0.5 -0.1 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.2 -0.9 +0.2 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -1.4 -0.1 +0.2 +0.7
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.2 +0.3 -0.2 +0.2
auxotrophy YNB Glucose +0.4 -0.6 +0.1 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.1 -0.5 +0.1 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.8 +0.3 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.5 -0.2 -0.2 -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.0 +0.1 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.6 +0.1 -0.3 +0.6
growth on ypd YPD +0.5 -0.0 -0.5 +0.3 +0.3
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