Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12209 and 12210 are separated by 260 nucleotides12210 and 12211 are separated by 156 nucleotides12211 and 12212 are separated by 115 nucleotides12212 and 12213 are separated by 472 nucleotides mRNA_3841: 12209 - K13431 SRPR signal recognition particle receptor subunit alpha, at 716,088 to 718,591 12209 mRNA_3842: 12210 - K18179 COA6 cytochrome c oxidase assembly factor 6, at 718,852 to 719,357 12210 mRNA_3843: 12211 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 719,514 to 723,213 12211 mRNA_3844: 12212 - HMMPfam-Afadin- and alpha -actinin-Binding-PF11559, at 723,329 to 725,612 12212 mRNA_3845: 12213 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 726,085 to 727,619 12213
Group Condition mRNA_3841 mRNA_3842 mRNA_3843 mRNA_3844 mRNA_3845
12209 12210 12211 12212 12213
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 -0.1 -0.2 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -1.5 -0.4 +0.3 +0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.4 +0.0 +0.2 +0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 -0.1 +0.2 +0.7 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 +0.0 -0.3 -0.3
growth on ricinoleic acid YNB Glucose -0.5 -0.4 +0.0 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 +0.4 -0.0 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.3 -0.0 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.0 -0.2 -0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 -0.0 -0.1 +0.0
growth on oleic acid YNB Glucose -0.6 +0.1 -0.1 +0.1 +0.2
growth on oleic acid YNB Oleic Acid -0.5 -0.5 -0.0 +0.4 +0.3
growth on ypd YPD -0.0 -0.5 +0.3 +0.3 -0.3
auxotrophy YNB Glucose -0.6 +0.1 -0.2 -0.1 +0.6
auxotrophy Dropout Complete -0.5 -0.1 -0.1 +0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.8 +0.3 -0.2 +0.1 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.5 +0.1 +0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.9 +0.2 +0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.3 -0.2 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 -0.0 -0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.1 -0.3 +0.6 +0.3
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