Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12220 and 12221 are separated by 678 nucleotides12221 and 12222 are separated by 747 nucleotides12222 and 12223 are separated by 272 nucleotides12223 and 12224 are separated by 151 nucleotides mRNA_3852: 12220 - HMMPfam-Glutathione S-transferase, C-terminal domain-PF00043,HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF47616,SUPERFAMILY--SSF52833, at 744,290 to 745,525 12220 mRNA_3853: 12221 - K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other, at 746,204 to 748,742 12221 mRNA_3854: 12222 - Hypothetical Protein, at 749,490 to 750,342 12222 mRNA_3855: 12223 - SUPERFAMILY--SSF52047, at 750,615 to 752,769 12223 mRNA_3856: 12224 - Hypothetical Protein, at 752,921 to 753,919 12224
Group Condition mRNA_3852 mRNA_3853 mRNA_3854 mRNA_3855 mRNA_3856
12220 12221 12222 12223 12224
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.2 -0.1 -0.5 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.2 -0.9 -0.3 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.1 -0.6 -0.5 +0.1
growth on oleic acid YNB Glucose -0.3 -0.2 -0.4 -0.5 -0.1
growth on ypd YPD -0.4 -0.2 -0.2 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.0 -0.3 -0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.2 -0.5 -0.1 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.1 -0.5 -0.2 -0.3
auxotrophy YNB Glucose +0.0 -0.0 -0.3 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.2 -0.7 +0.1 -0.6
growth on oleic acid YNB Oleic Acid -0.2 -0.1 -0.2 -0.6 +0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -0.4 -0.3 +0.2
auxotrophy Dropout Complete -0.1 -0.1 -0.1 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.7 +0.0 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.6 -0.6 +0.0 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 -0.7 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 -0.4 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 -0.7 +0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.5 -0.4 -0.4 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 -0.0 +0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 +0.0 +0.1 +0.5
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