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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12221 and 12222 are separated by 747 nucleotides
12222 and 12223 are separated by 272 nucleotides
12223 and 12224 are separated by 151 nucleotides
12224 and 12225 are separated by 162 nucleotides
mRNA_3853: 12221 - K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other, at 746,204 to 748,742
12221
mRNA_3854: 12222 - Hypothetical Protein, at 749,490 to 750,342
12222
mRNA_3855: 12223 - SUPERFAMILY--SSF52047, at 750,615 to 752,769
12223
mRNA_3856: 12224 - Hypothetical Protein, at 752,921 to 753,919
12224
mRNA_3857: 12225 - Interpro Mysoin-binding motif of peroxisomes, at 754,082 to 757,282
12225
Group
Condition
mRNA
_3853
mRNA
_3854
mRNA
_3855
mRNA
_3856
mRNA
_3857
12221
12222
12223
12224
12225
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.6
-0.5
+0.1
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-0.6
+0.0
-0.8
-0.6
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.5
-0.2
-0.3
-0.4
auxotrophy
YNB Glucose
-0.0
-0.3
-0.3
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.3
-0.1
-0.5
-0.1
growth on ypd
YPD
-0.2
-0.2
-0.2
-0.2
-0.3
growth on oleic acid
YNB Glucose
-0.2
-0.4
-0.5
-0.1
+0.1
auxotrophy
Dropout Complete
-0.1
-0.1
-0.2
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.7
+0.1
-0.6
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.9
-0.3
+0.3
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
-0.6
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.7
+0.3
+0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.1
-0.5
-0.6
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.5
-0.1
-0.6
+0.3
growth on ricinoleic acid
YNB Glucose
-0.2
-0.4
-0.3
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.7
+0.1
+0.0
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.7
+0.0
+0.4
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
-0.4
-0.4
+0.4
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.4
+0.4
-0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.0
+0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.0
+0.1
+0.5
-0.1
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