Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12224 and 12225 are separated by 162 nucleotides
12225 and 12226 are separated by 602 nucleotides
12226 and 12227 are separated by 298 nucleotides
12227 and 12228 are separated by 359 nucleotides
mRNA_3856: 12224 - Hypothetical Protein, at 752,921 to 753,919
12224
mRNA_3857: 12225 - Interpro Mysoin-binding motif of peroxisomes, at 754,082 to 757,282
12225
mRNA_3858: 12226 - K17890 ATG16L1 autophagy-related protein 16-1, at 757,885 to 761,783
12226
mRNA_3859: 12227 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 762,082 to 763,041
12227
mRNA_3860: 12228 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 763,401 to 765,833
12228
Group
Condition
mRNA
_3856
mRNA
_3857
mRNA
_3858
mRNA
_3859
mRNA
_3860
12224
12225
12226
12227
12228
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-0.6
+0.1
-0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
+0.6
-0.4
-0.5
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.6
-0.2
-0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
+0.3
+0.3
-0.5
-0.0
growth on ypd
YPD
-0.2
-0.3
+0.1
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.1
+0.0
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.4
+0.1
+0.4
+0.0
auxotrophy
YNB Glucose
-0.3
-0.3
-0.0
+0.4
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.5
-0.1
-0.3
-0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.3
-0.1
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.0
-0.2
-0.2
+0.1
auxotrophy
Dropout Complete
-0.2
-0.5
+0.2
+0.4
+0.1
growth on oleic acid
YNB Glucose
-0.1
+0.1
-0.1
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
+0.0
+0.1
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.3
+0.1
+0.4
+0.1
growth on ricinoleic acid
YNB Glucose
+0.2
-0.0
+0.1
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.2
-0.1
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
-0.0
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.0
-0.2
+0.5
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.2
-0.1
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.2
+0.3
+0.6
+0.1
remove
mRNA_3856
plot
remove
mRNA_3857
plot
remove
mRNA_3858
remove
mRNA_3859
plot
remove
mRNA_3860
plot