Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12226 and 12227 are separated by 298 nucleotides12227 and 12228 are separated by 359 nucleotides12228 and 12229 are separated by 454 nucleotides12229 and 12230 are separated by 217 nucleotides mRNA_3858: 12226 - K17890 ATG16L1 autophagy-related protein 16-1, at 757,885 to 761,783 12226 mRNA_3859: 12227 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 762,082 to 763,041 12227 mRNA_3860: 12228 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 763,401 to 765,833 12228 mRNA_3861: 12229 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 766,288 to 767,441 12229 mRNA_3862: 12230 - SUPERFAMILY--SSF52047, at 767,659 to 769,319 12230
Group Condition mRNA_3858 mRNA_3859 mRNA_3860 mRNA_3861 mRNA_3862
12226 12227 12228 12229 12230
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.5 -0.0 -0.9 -0.8
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 +0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 +0.1 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 +0.1 +0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.0 -0.1 +0.2
growth on ypd YPD +0.1 +0.1 -0.2 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 -0.1 +0.5 -0.1
growth on oleic acid YNB Glucose -0.1 -0.0 +0.2 -0.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 +0.0 +0.3 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.3 +0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.5 +0.1 +0.3 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.5 -0.0 +0.2 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 -0.1 +0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.4 +0.0 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.4 +0.1 +0.1 +0.0
auxotrophy YNB Glucose -0.0 +0.4 +0.0 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.4 +0.2 +0.4 -0.2
growth on oleic acid YNB Oleic Acid -0.0 +0.4 +0.1 +0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.1 +0.4 +0.4
auxotrophy Dropout Complete +0.2 +0.4 +0.1 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.6 +0.1 +0.4 +0.1
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