Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12228 and 12229 are separated by 454 nucleotides12229 and 12230 are separated by 217 nucleotides12230 and 12231 are separated by 501 nucleotides12231 and 12232 are separated by 305 nucleotides mRNA_3860: 12228 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 763,401 to 765,833 12228 mRNA_3861: 12229 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 766,288 to 767,441 12229 mRNA_3862: 12230 - SUPERFAMILY--SSF52047, at 767,659 to 769,319 12230 mRNA_3863: 12231 - KOG1434 Meiotic recombination protein Dmc1, at 769,821 to 771,118 12231 mRNA_3864: 12232 - K08737 MSH6 DNA mismatch repair protein MSH6, at 771,424 to 775,679 12232
Group Condition mRNA_3860 mRNA_3861 mRNA_3862 mRNA_3863 mRNA_3864
12228 12229 12230 12231 12232
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.9 -0.8 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 -0.1 N.D. +0.1
growth on ypd YPD -0.2 +0.2 -0.1 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.3 -0.5 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 +0.0 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 +0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.2 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 -0.3 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.5 -0.1 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 -0.1 N.D. +0.1
auxotrophy YNB Glucose +0.0 +0.2 +0.1 N.D. +0.0
growth on oleic acid YNB Glucose +0.2 -0.0 +0.3 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.4 -0.2 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 +0.4 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.2 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.3 +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.4 +0.1 N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.4 +0.4 N.D. +0.1
auxotrophy Dropout Complete +0.1 +0.4 +0.3 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.2 +0.6 N.D. +0.3
remove
mRNA_3860
plot
remove
mRNA_3861
plot
remove
mRNA_3862
remove
mRNA_3863
plot
remove
mRNA_3864
plot