Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12234 and 12235 are separated by 1159 nucleotides12235 and 12236 are separated by 254 nucleotides12236 and 12237 are separated by 208 nucleotides12237 and 12238 are separated by 293 nucleotides mRNA_3866: 12234 - Hypothetical Protein, at 780,640 to 781,665 12234 mRNA_3867: 12235 - KOG1812 Predicted E3 ubiquitin ligase, at 782,825 to 783,717 12235 mRNA_3868: 12236 - KOG0603 Ribosomal protein S6 kinase, at 783,972 to 787,068 12236 mRNA_3869: 12237 - KOG3207 Beta-tubulin folding cofactor E, at 787,277 to 789,620 12237 mRNA_3870: 12238 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448, at 789,914 to 792,634 12238
Group Condition mRNA_3866 mRNA_3867 mRNA_3868 mRNA_3869 mRNA_3870
12234 12235 12236 12237 12238
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.0 -0.3 -0.8 +0.1
growth on ypd YPD N.D. -0.4 -0.0 -0.4 +0.0
growth on oleic acid YNB Oleic Acid N.D. -0.8 +0.3 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 -0.2 -0.2 -0.4
growth on oleic acid YNB Glucose N.D. -0.6 +0.1 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 +0.5 -0.2 -0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 -0.0 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 +0.1 -0.2 -0.5
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.1 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.1 +0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 -0.2 +0.2 -0.4
auxotrophy YNB Glucose N.D. +0.1 -0.0 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.4 -0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 +0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.1 -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 +0.3 +0.2 -0.7
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 +0.1 -0.1 -0.2
auxotrophy Dropout Complete N.D. +0.5 -0.0 +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.4 -0.1 -0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.5 +0.2 +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 +0.4 -0.0 -0.2
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