Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12236 and 12237 are separated by 208 nucleotides12237 and 12238 are separated by 293 nucleotides12238 and 12239 are separated by 304 nucleotides12239 and 12240 are separated by 925 nucleotides mRNA_3868: 12236 - KOG0603 Ribosomal protein S6 kinase, at 783,972 to 787,068 12236 mRNA_3869: 12237 - KOG3207 Beta-tubulin folding cofactor E, at 787,277 to 789,620 12237 mRNA_3870: 12238 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448, at 789,914 to 792,634 12238 mRNA_3871: 12239 - K10295 FBXO9 F-box protein 9, at 792,939 to 793,930 12239 mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794,856 to 799,909 12240
Group Condition mRNA_3868 mRNA_3869 mRNA_3870 mRNA_3871 mRNA_3872
12236 12237 12238 12239 12240
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 -0.4 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 -0.4 -0.2 -0.3
growth on ypd YPD -0.0 -0.4 +0.0 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 -0.5 -0.0 -0.0
growth on oleic acid YNB Glucose +0.1 -0.2 -0.1 -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.8 +0.1 +0.2 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.2 -0.5 -0.0 -0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -0.2 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 -0.2 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 -0.4 +0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 -0.0 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 -0.7 +0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.3 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.2 +0.1 -0.0
growth on oleic acid YNB Oleic Acid +0.3 -0.2 -0.1 -0.0 -0.1
auxotrophy Dropout Complete -0.0 +0.0 -0.2 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 -0.0 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 -0.2 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.1 -0.0 +0.1
auxotrophy YNB Glucose -0.0 -0.1 -0.2 +0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.0 -0.2 +0.2 +0.1
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