Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12237 and 12238 are separated by 293 nucleotides12238 and 12239 are separated by 304 nucleotides12239 and 12240 are separated by 925 nucleotides12240 and 12241 are separated by 196 nucleotides mRNA_3869: 12237 - KOG3207 Beta-tubulin folding cofactor E, at 787,277 to 789,620 12237 mRNA_3870: 12238 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448, at 789,914 to 792,634 12238 mRNA_3871: 12239 - K10295 FBXO9 F-box protein 9, at 792,939 to 793,930 12239 mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794,856 to 799,909 12240 mRNA_3873: 12241 - BLAST putative protein [Neurospora crassa], at 800,106 to 800,939 12241
Group Condition mRNA_3869 mRNA_3870 mRNA_3871 mRNA_3872 mRNA_3873
12237 12238 12239 12240 12241
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.5 -0.0 -0.3 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.5 -0.0 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 +0.1 +0.2 +0.3 -0.5
growth on ypd YPD -0.4 +0.0 -0.1 -0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.4 -0.2 -0.3 +0.2
growth on oleic acid YNB Glucose -0.2 -0.1 -0.2 -0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 +0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.4 -0.0 -0.2 +0.5
growth on ricinoleic acid YNB Glucose -0.1 -0.2 +0.2 -0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.7 +0.3 -0.4 +0.3
growth on oleic acid YNB Oleic Acid -0.2 -0.1 -0.0 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 +0.2 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.4 +0.2 -0.1 +0.2
auxotrophy Dropout Complete +0.0 -0.2 +0.1 -0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 +0.0 -0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 +0.1 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 -0.1 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 -0.1 +0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.0 +0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.0 +0.1 +0.2
auxotrophy YNB Glucose -0.1 -0.2 +0.3 +0.1 +0.2
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