Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12238 and 12239 are separated by 304 nucleotides12239 and 12240 are separated by 925 nucleotides12240 and 12241 are separated by 196 nucleotides12241 and 12242 are separated by 71 nucleotides mRNA_3870: 12238 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448, at 789,914 to 792,634 12238 mRNA_3871: 12239 - K10295 FBXO9 F-box protein 9, at 792,939 to 793,930 12239 mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794,856 to 799,909 12240 mRNA_3873: 12241 - BLAST putative protein [Neurospora crassa], at 800,106 to 800,939 12241 mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801,011 to 802,122 12242
Group Condition mRNA_3870 mRNA_3871 mRNA_3872 mRNA_3873 mRNA_3874
12238 12239 12240 12241 12242
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0 -0.3 -0.8 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.0 -0.0 -0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.2 -0.3 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.0 -0.2 +0.5 -0.5
growth on oleic acid YNB Glucose -0.1 -0.2 -0.3 +0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.2 +0.2 -0.2 +0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.2 -0.1 +0.2 -0.3
growth on ypd YPD +0.0 -0.1 -0.2 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 +0.1 +0.3 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.2 +0.3 -0.5 -0.5
growth on oleic acid YNB Oleic Acid -0.1 -0.0 -0.1 +0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.3 -0.4 +0.3 +0.2
auxotrophy Dropout Complete -0.2 +0.1 -0.0 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 +0.2 +0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.1 -0.0 -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 -0.0 +0.3 -0.1
auxotrophy YNB Glucose -0.2 +0.3 +0.1 +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.0 -0.1 +0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 +0.1 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 +0.1 -0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 +0.1 +0.4 +0.2
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