Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12239 and 12240 are separated by 925 nucleotides12240 and 12241 are separated by 196 nucleotides12241 and 12242 are separated by 71 nucleotides12242 and 12243 are separated by 318 nucleotides mRNA_3871: 12239 - K10295 FBXO9 F-box protein 9, at 792,939 to 793,930 12239 mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794,856 to 799,909 12240 mRNA_3873: 12241 - BLAST putative protein [Neurospora crassa], at 800,106 to 800,939 12241 mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801,011 to 802,122 12242 mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802,441 to 804,314 12243
Group Condition mRNA_3871 mRNA_3872 mRNA_3873 mRNA_3874 mRNA_3875
12239 12240 12241 12242 12243
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.3 -0.8 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.3 -0.5 -0.5 -0.3
growth on oleic acid YNB Glucose -0.2 -0.3 +0.2 -0.3 +0.0
growth on ypd YPD -0.1 -0.2 +0.0 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 +0.2 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.0 -0.1 -0.5 +0.5
growth on ricinoleic acid YNB Glucose +0.2 -0.2 +0.0 -0.4 +0.3
growth on oleic acid YNB Oleic Acid -0.0 -0.1 +0.2 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 +0.3 -0.8 +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 +0.2 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 +0.5 -0.5 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 -0.2 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 +0.2 -0.3 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 +0.4 -0.4 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 +0.4 +0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.4 +0.3 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 -0.1 +0.4 -0.0
auxotrophy Dropout Complete +0.1 -0.0 +0.1 -0.2 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.0 +0.3 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 +0.4 +0.2 +0.1
auxotrophy YNB Glucose +0.3 +0.1 +0.2 -0.2 +0.6
remove
mRNA_3871
plot
remove
mRNA_3872
plot
remove
mRNA_3873
remove
mRNA_3874
plot
remove
mRNA_3875
plot