Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12240 and 12241 are separated by 196 nucleotides12241 and 12242 are separated by 71 nucleotides12242 and 12243 are separated by 318 nucleotides12243 and 12244 are separated by 425 nucleotides mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794,856 to 799,909 12240 mRNA_3873: 12241 - BLAST putative protein [Neurospora crassa], at 800,106 to 800,939 12241 mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801,011 to 802,122 12242 mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802,441 to 804,314 12243 mRNA_3876: 12244 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 804,740 to 806,816 12244
Group Condition mRNA_3872 mRNA_3873 mRNA_3874 mRNA_3875 mRNA_3876
12240 12241 12242 12243 12244
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.5 -0.5 -0.3 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.8 -0.2 -0.1 -0.1
growth on ypd YPD -0.2 +0.0 -0.2 -0.0 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.2 -0.2 +0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 +0.1 +0.2 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 -0.3 +0.4 -0.5
growth on oleic acid YNB Glucose -0.3 +0.2 -0.3 +0.0 +0.0
growth on ricinoleic acid YNB Glucose -0.2 +0.0 -0.4 +0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.3 -0.1 +0.3 -0.7
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 +0.1 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.5 -0.5 +0.5 -0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.2 -0.4 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.4 -0.4 +0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.4 +0.2 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 -0.8 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 -0.5 +0.5 +0.4
auxotrophy Dropout Complete -0.0 +0.1 -0.2 +0.5 -0.0
auxotrophy YNB Glucose +0.1 +0.2 -0.2 +0.6 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 +0.4 -0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.3 +0.2 +0.0 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.4 +0.2 +0.1 -0.0
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