Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12240 and 12241 are separated by 196 nucleotides
12241 and 12242 are separated by 71 nucleotides
12242 and 12243 are separated by 318 nucleotides
12243 and 12244 are separated by 425 nucleotides
mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794,856 to 799,909
12240
mRNA_3873: 12241 - BLAST putative protein [Neurospora crassa], at 800,106 to 800,939
12241
mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801,011 to 802,122
12242
mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802,441 to 804,314
12243
mRNA_3876: 12244 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 804,740 to 806,816
12244
Group
Condition
mRNA
_3872
mRNA
_3873
mRNA
_3874
mRNA
_3875
mRNA
_3876
12240
12241
12242
12243
12244
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.5
-0.5
-0.3
-1.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.8
-0.2
-0.1
-0.1
growth on ypd
YPD
-0.2
+0.0
-0.2
-0.0
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.2
-0.2
+0.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.2
+0.1
+0.2
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
-0.3
+0.4
-0.5
growth on oleic acid
YNB Glucose
-0.3
+0.2
-0.3
+0.0
+0.0
growth on ricinoleic acid
YNB Glucose
-0.2
+0.0
-0.4
+0.3
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.3
-0.1
+0.3
-0.7
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
+0.1
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.5
-0.5
+0.5
-0.3
growth on oleic acid
YNB Oleic Acid
-0.1
+0.2
-0.4
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.4
-0.4
+0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.4
+0.2
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.3
-0.8
+0.5
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.1
-0.5
+0.5
+0.4
auxotrophy
Dropout Complete
-0.0
+0.1
-0.2
+0.5
-0.0
auxotrophy
YNB Glucose
+0.1
+0.2
-0.2
+0.6
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.1
+0.4
-0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.3
+0.2
+0.0
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.4
+0.2
+0.1
-0.0
remove
mRNA_3872
plot
remove
mRNA_3873
plot
remove
mRNA_3874
remove
mRNA_3875
plot
remove
mRNA_3876
plot