Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12241 and 12242 are separated by 71 nucleotides12242 and 12243 are separated by 318 nucleotides12243 and 12244 are separated by 425 nucleotides12244 and 12245 are separated by 417 nucleotides mRNA_3873: 12241 - BLAST putative protein [Neurospora crassa], at 800,106 to 800,939 12241 mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801,011 to 802,122 12242 mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802,441 to 804,314 12243 mRNA_3876: 12244 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 804,740 to 806,816 12244 mRNA_3877: 12245 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 807,234 to 808,789 12245
Group Condition mRNA_3873 mRNA_3874 mRNA_3875 mRNA_3876 mRNA_3877
12241 12242 12243 12244 12245
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.5 -0.3 -1.3 N.D.
growth on ypd YPD +0.0 -0.2 -0.0 -0.9 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.2 -0.1 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 +0.2 -0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.3 +0.4 -0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.3 -0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.2 +0.0 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.1 +0.3 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.4 +0.2 -0.3 N.D.
growth on oleic acid YNB Glucose +0.2 -0.3 +0.0 +0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.0 -0.4 +0.3 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.8 +0.5 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.4 +0.2 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.2 -0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.5 +0.5 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.5 +0.5 +0.4 N.D.
auxotrophy YNB Glucose +0.2 -0.2 +0.6 -0.3 N.D.
auxotrophy Dropout Complete +0.1 -0.2 +0.5 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.4 -0.0 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.2 +0.1 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 +0.0 +0.5 N.D.
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