Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12242 and 12243 are separated by 318 nucleotides12243 and 12244 are separated by 425 nucleotides12244 and 12245 are separated by 417 nucleotides12245 and 12246 are separated by 1014 nucleotides mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801,011 to 802,122 12242 mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802,441 to 804,314 12243 mRNA_3876: 12244 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 804,740 to 806,816 12244 mRNA_3877: 12245 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 807,234 to 808,789 12245 mRNA_3878: 12246 - K07975 K07975 Rho family, other, at 809,804 to 811,045 12246
Group Condition mRNA_3874 mRNA_3875 mRNA_3876 mRNA_3877 mRNA_3878
12242 12243 12244 12245 12246
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.3 -1.3 N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.0 -0.2 N.D. -0.7
growth on ypd YPD -0.2 -0.0 -0.9 N.D. +0.3
growth on oleic acid YNB Glucose -0.3 +0.0 +0.0 N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.3 -0.7 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.3 -0.4 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.3 -0.2 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.1 -0.1 N.D. +0.1
growth on oleic acid YNB Oleic Acid -0.4 +0.2 +0.0 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.4 +0.3 +0.0 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.4 -0.5 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 +0.5 +0.1 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 -0.6 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.5 -0.3 N.D. +0.3
auxotrophy Dropout Complete -0.2 +0.5 -0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.2 -0.3 N.D. +0.7
auxotrophy YNB Glucose -0.2 +0.6 -0.3 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 -0.0 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.0 +0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.0 +0.5 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.5 +0.4 N.D. +0.4
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