Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12243 and 12244 are separated by 425 nucleotides12244 and 12245 are separated by 417 nucleotides12245 and 12246 are separated by 1014 nucleotides12246 and 12247 are separated by 128 nucleotides mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802,441 to 804,314 12243 mRNA_3876: 12244 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 804,740 to 806,816 12244 mRNA_3877: 12245 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 807,234 to 808,789 12245 mRNA_3878: 12246 - K07975 K07975 Rho family, other, at 809,804 to 811,045 12246 mRNA_3879: 12247 - Interpro Selenoprotein SelK_SelG, at 811,174 to 811,650 12247
Group Condition mRNA_3875 mRNA_3876 mRNA_3877 mRNA_3878 mRNA_3879
12243 12244 12245 12246 12247
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -1.3 N.D. -0.0 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.2 N.D. -0.7 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.4 N.D. +0.1 +0.0
growth on ypd YPD -0.0 -0.9 N.D. +0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 N.D. -0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.6 N.D. +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 N.D. +0.1 -0.3
growth on oleic acid YNB Glucose +0.0 +0.0 N.D. -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.3 N.D. +0.3 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.5 N.D. -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 N.D. -0.1 +0.3
growth on ricinoleic acid YNB Glucose +0.3 +0.0 N.D. -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 N.D. +0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.0 N.D. -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.3 N.D. +0.7 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.4 N.D. +0.4 -0.7
auxotrophy YNB Glucose +0.6 -0.3 N.D. +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.7 N.D. +0.1 +1.1
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.5 N.D. +0.3 +0.7
auxotrophy Dropout Complete +0.5 -0.0 N.D. -0.2 +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.1 N.D. +0.1 +0.4
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