Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12244 and 12245 are separated by 417 nucleotides12245 and 12246 are separated by 1014 nucleotides12246 and 12247 are separated by 128 nucleotides12247 and 12248 are separated by 566 nucleotides mRNA_3876: 12244 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 804,740 to 806,816 12244 mRNA_3877: 12245 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 807,234 to 808,789 12245 mRNA_3878: 12246 - K07975 K07975 Rho family, other, at 809,804 to 811,045 12246 mRNA_3879: 12247 - Interpro Selenoprotein SelK_SelG, at 811,174 to 811,650 12247 mRNA_3880: 12248 - K00262 E1.4.1.4, gdhA glutamate dehydrogenase (NADP+), at 812,217 to 813,988 12248
Group Condition mRNA_3876 mRNA_3877 mRNA_3878 mRNA_3879 mRNA_3880
12244 12245 12246 12247 12248
auxotrophy YNB Glucose -0.3 N.D. +0.2 +0.2 -4.0
growth on oleic acid YNB Glucose +0.0 N.D. -0.3 +0.1 -3.4
growth on ricinoleic acid YNB Glucose +0.0 N.D. -0.2 +0.2 -3.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.7 -0.2 -1.6
facs on lipid accumulation Sorted High BODIPY Gate -0.6 N.D. +0.2 -0.0 -1.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. +0.1 +0.4 -2.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.1 -0.3 -2.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 N.D. -0.0 -0.7 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 N.D. -0.1 -0.3 -1.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 N.D. +0.4 -0.7 -1.7
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. +0.3 +0.7 -2.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.3 -0.4 -1.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.1 +0.3 -1.5
auxotrophy YNB Glucose 75mM Arginine -0.7 N.D. +0.1 +1.1 -1.6
growth on oleic acid YNB Oleic Acid +0.0 N.D. -0.1 +0.3 -1.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. +0.1 +0.0 -0.5
growth on ypd YPD -0.9 N.D. +0.3 +0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.3 +0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.0 +0.2 -0.4
auxotrophy Dropout Complete -0.0 N.D. -0.2 +0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +0.7 -0.1 +0.2
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