Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12245 and 12246 are separated by 1014 nucleotides12246 and 12247 are separated by 128 nucleotides12247 and 12248 are separated by 566 nucleotides12248 and 12249 are separated by 379 nucleotides mRNA_3877: 12245 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 807,234 to 808,789 12245 mRNA_3878: 12246 - K07975 K07975 Rho family, other, at 809,804 to 811,045 12246 mRNA_3879: 12247 - Interpro Selenoprotein SelK_SelG, at 811,174 to 811,650 12247 mRNA_3880: 12248 - K00262 E1.4.1.4, gdhA glutamate dehydrogenase (NADP+), at 812,217 to 813,988 12248 mRNA_3881: 12249 - Hypothetical Protein, at 814,368 to 814,862 12249
Group Condition mRNA_3877 mRNA_3878 mRNA_3879 mRNA_3880 mRNA_3881
12245 12246 12247 12248 12249
growth on oleic acid YNB Glucose N.D. -0.3 +0.1 -3.4 -0.3
auxotrophy YNB Glucose N.D. +0.2 +0.2 -4.0 -0.0
growth on ricinoleic acid YNB Glucose N.D. -0.2 +0.2 -3.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.7 -0.2 -1.6 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.4 -2.9 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.3 -1.6 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.4 -0.7 -1.7 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.3 -2.1 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.0 -0.7 -0.1 -0.7
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 -0.0 -1.9 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.7 -2.0 -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 +0.3 -1.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 +0.3 -1.5 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.4 -1.1 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 +0.1 -0.8 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.0 -0.5 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 +0.2 -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +1.1 -1.6 +0.1
growth on ypd YPD N.D. +0.3 +0.3 -0.2 -0.3
auxotrophy Dropout Complete N.D. -0.2 +0.7 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.7 -0.1 +0.2 +0.5
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