Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12246 and 12247 are separated by 128 nucleotides12247 and 12248 are separated by 566 nucleotides12248 and 12249 are separated by 379 nucleotides12249 and 12250 are separated by 337 nucleotides mRNA_3878: 12246 - K07975 K07975 Rho family, other, at 809,804 to 811,045 12246 mRNA_3879: 12247 - Interpro Selenoprotein SelK_SelG, at 811,174 to 811,650 12247 mRNA_3880: 12248 - K00262 E1.4.1.4, gdhA glutamate dehydrogenase (NADP+), at 812,217 to 813,988 12248 mRNA_3881: 12249 - Hypothetical Protein, at 814,368 to 814,862 12249 mRNA_3882: 12250 - Hypothetical Protein, at 815,200 to 816,864 12250
Group Condition mRNA_3878 mRNA_3879 mRNA_3880 mRNA_3881 mRNA_3882
12246 12247 12248 12249 12250
growth on oleic acid YNB Glucose -0.3 +0.1 -3.4 -0.3 +0.2
auxotrophy YNB Glucose +0.2 +0.2 -4.0 -0.0 +0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.2 -3.3 -0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.2 -1.6 -0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.3 -1.6 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.4 -2.9 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.7 -1.7 +0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.7 -0.1 -0.7 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.3 -2.1 +0.4 +0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.3 -1.0 -0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 -1.9 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.7 -2.0 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.4 -1.1 +0.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 -0.4 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 -0.5 -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.1 -0.8 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.3 -1.5 +0.5 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 +1.1 -1.6 +0.1 -0.1
growth on ypd YPD +0.3 +0.3 -0.2 -0.3 -0.1
auxotrophy Dropout Complete -0.2 +0.7 -0.2 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 -0.1 +0.2 +0.5 -0.2
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