Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12248 and 12249 are separated by 379 nucleotides12249 and 12250 are separated by 337 nucleotides12250 and 12251 are separated by 702 nucleotides12251 and 12252 are separated by 134 nucleotides mRNA_3880: 12248 - K00262 E1.4.1.4, gdhA glutamate dehydrogenase (NADP+), at 812,217 to 813,988 12248 mRNA_3881: 12249 - Hypothetical Protein, at 814,368 to 814,862 12249 mRNA_3882: 12250 - Hypothetical Protein, at 815,200 to 816,864 12250 mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817,567 to 820,111 12251 mRNA_3884: 12252 - Hypothetical Protein, at 820,246 to 821,511 12252
Group Condition mRNA_3880 mRNA_3881 mRNA_3882 mRNA_3883 mRNA_3884
12248 12249 12250 12251 12252
auxotrophy YNB Glucose -4.0 -0.0 +0.1 +0.0 +0.0
growth on ricinoleic acid YNB Glucose -3.3 -0.2 +0.2 -0.1 -0.2
growth on oleic acid YNB Glucose -3.4 -0.3 +0.2 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.9 +0.0 -0.0 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.6 -0.3 -0.2 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.6 -0.4 -0.1 -0.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -2.1 +0.4 +0.3 -0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine -2.0 -0.1 -0.0 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.7 +0.1 -0.2 -0.2 +0.1
growth on oleic acid YNB Oleic Acid -1.0 -0.3 -0.3 -0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.9 +0.3 +0.1 -0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine -1.6 +0.1 -0.1 -0.0 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.7 -0.2 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.1 +0.4 -0.3 -0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -1.5 +0.5 +0.5 -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.0 -0.1 -0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.2 -0.3 +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.0 -0.2 +0.1 +0.1
growth on ypd YPD -0.2 -0.3 -0.1 -0.0 +0.1
auxotrophy Dropout Complete -0.2 -0.0 -0.0 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.5 -0.2 -0.2 +0.3
remove
mRNA_3880
plot
remove
mRNA_3881
plot
remove
mRNA_3882
remove
mRNA_3883
plot
remove
mRNA_3884
plot