Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12249 and 12250 are separated by 337 nucleotides12250 and 12251 are separated by 702 nucleotides12251 and 12252 are separated by 134 nucleotides12252 and 12253 are separated by 1275 nucleotides mRNA_3881: 12249 - Hypothetical Protein, at 814,368 to 814,862 12249 mRNA_3882: 12250 - Hypothetical Protein, at 815,200 to 816,864 12250 mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817,567 to 820,111 12251 mRNA_3884: 12252 - Hypothetical Protein, at 820,246 to 821,511 12252 mRNA_3885: 12253 - K00773 tgt, QTRT1 queuine tRNA-ribosyltransferase, at 822,787 to 823,648 12253
Group Condition mRNA_3881 mRNA_3882 mRNA_3883 mRNA_3884 mRNA_3885
12249 12250 12251 12252 12253
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.3 -0.4 -0.3 -1.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1 -0.5 +0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.3 -0.1 +0.0 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.2 -0.4 -0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.2 +0.2 -0.2 +0.0
growth on oleic acid YNB Glucose -0.3 +0.2 -0.1 +0.1 -0.8
growth on ricinoleic acid YNB Glucose -0.2 +0.2 -0.1 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 -0.2 +0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 +0.0 +0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 -0.1 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.2 -0.2 +0.3 -0.9
growth on ypd YPD -0.3 -0.1 -0.0 +0.1 -0.2
auxotrophy Dropout Complete -0.0 -0.0 -0.1 +0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.0 +0.2 -0.5
auxotrophy YNB Glucose -0.0 +0.1 +0.0 +0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 +0.1 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.5 +0.5 -0.0 -0.2 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.0 -0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.3 -0.1 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 -0.2 +0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 -0.0 +0.2 -0.0
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