Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12250 and 12251 are separated by 702 nucleotides12251 and 12252 are separated by 134 nucleotides12252 and 12253 are separated by 1275 nucleotides12253 and 12254 are separated by 264 nucleotides mRNA_3882: 12250 - Hypothetical Protein, at 815,200 to 816,864 12250 mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817,567 to 820,111 12251 mRNA_3884: 12252 - Hypothetical Protein, at 820,246 to 821,511 12252 mRNA_3885: 12253 - K00773 tgt, QTRT1 queuine tRNA-ribosyltransferase, at 822,787 to 823,648 12253 mRNA_3886: 12254 - K14298 RAE1, GLE2 mRNA export factor, at 823,913 to 825,750 12254
Group Condition mRNA_3882 mRNA_3883 mRNA_3884 mRNA_3885 mRNA_3886
12250 12251 12252 12253 12254
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.4 -0.3 -1.2 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5 +0.1 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 +0.1 -0.4 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 +0.3 -0.9 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.4 -0.1 +0.0 -0.4
growth on ricinoleic acid YNB Glucose +0.2 -0.1 -0.2 -0.5 -0.5
growth on oleic acid YNB Glucose +0.2 -0.1 +0.1 -0.8 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.0 -0.2 -0.9 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 +0.2 -0.5 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 +0.1 -0.5 -0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.1 +0.0 -0.4 -0.1
auxotrophy YNB Glucose +0.1 +0.0 +0.0 -0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.2 +0.0 -0.3 -0.4
auxotrophy Dropout Complete -0.0 -0.1 +0.1 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 +0.1 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 -0.1 +0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.0 +0.1 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 +0.1 -0.1 -0.0
growth on ypd YPD -0.1 -0.0 +0.1 -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 +0.2 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.2 -0.2 +0.0 +0.6
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