Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12251 and 12252 are separated by 134 nucleotides12252 and 12253 are separated by 1275 nucleotides12253 and 12254 are separated by 264 nucleotides12254 and 12255 are separated by 467 nucleotides mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817,567 to 820,111 12251 mRNA_3884: 12252 - Hypothetical Protein, at 820,246 to 821,511 12252 mRNA_3885: 12253 - K00773 tgt, QTRT1 queuine tRNA-ribosyltransferase, at 822,787 to 823,648 12253 mRNA_3886: 12254 - K14298 RAE1, GLE2 mRNA export factor, at 823,913 to 825,750 12254 mRNA_3887: 12255 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 826,218 to 829,062 12255
Group Condition mRNA_3883 mRNA_3884 mRNA_3885 mRNA_3886 mRNA_3887
12251 12252 12253 12254 12255
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.3 -1.2 -0.7 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.0 -0.3 -0.4 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.1 -0.3 -0.4 -0.4
growth on oleic acid YNB Glucose -0.1 +0.1 -0.8 -0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.1 +0.0 -0.4 -0.5
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -0.5 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.3 -0.9 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 -0.4 -0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.2 -0.5 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 +0.1 -0.4 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 -0.9 -0.2 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 -0.5 -0.3 -0.1
auxotrophy YNB Glucose +0.0 +0.0 -0.4 -0.4 +0.0
auxotrophy Dropout Complete -0.1 +0.1 -0.4 -0.3 -0.0
growth on oleic acid YNB Oleic Acid -0.1 +0.0 -0.4 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 -0.3 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 -0.3 -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.1 -0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 -0.0 -0.1 -0.2
growth on ypd YPD -0.0 +0.1 -0.2 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 +0.0 +0.6 -0.4
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