Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12253 and 12254 are separated by 264 nucleotides12254 and 12255 are separated by 467 nucleotides12255 and 12256 are separated by 337 nucleotides12256 and 12257 are separated by 210 nucleotides mRNA_3885: 12253 - K00773 tgt, QTRT1 queuine tRNA-ribosyltransferase, at 822,787 to 823,648 12253 mRNA_3886: 12254 - K14298 RAE1, GLE2 mRNA export factor, at 823,913 to 825,750 12254 mRNA_3887: 12255 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 826,218 to 829,062 12255 mRNA_3888: 12256 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 829,400 to 831,173 12256 mRNA_3889: 12257 - K00587 ICMT, STE14 protein-S-isoprenylcysteine O-methyltransferase, at 831,384 to 832,562 12257
Group Condition mRNA_3885 mRNA_3886 mRNA_3887 mRNA_3888 mRNA_3889
12253 12254 12255 12256 12257
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.7 -0.2 +0.1 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.4 -0.5 -0.1 -1.4
growth on ricinoleic acid YNB Glucose -0.5 -0.5 -0.1 -0.1 -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.4 -0.7 +0.3 -1.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.4 -0.4 -0.1 -1.0
growth on oleic acid YNB Glucose -0.8 -0.2 -0.4 -0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.4 -0.3 -0.3 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.5 -0.1 -0.2 -0.0
auxotrophy YNB Glucose -0.4 -0.4 +0.0 +0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.2 +0.4 +0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.3 -0.1 +0.2 -0.2
auxotrophy Dropout Complete -0.4 -0.3 -0.0 +0.1 -0.1
growth on ypd YPD -0.2 +0.1 +0.2 +0.1 -1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 -0.4 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 -0.2 -0.2 +0.4 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.6 -0.4 -0.3 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.1 -0.3 -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.3 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 +0.1 +0.0 -0.0
growth on oleic acid YNB Oleic Acid -0.4 -0.1 -0.1 -0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 -0.2 +0.4 +0.4
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